Влияние стресс-зависимых изменений текучести мембран на экспрессию генов у цианобактерии Synechocystis sp. PCC 6803
Диссертация
Накопление ПНЖК в клетках Synechocystis sp., индуцированное снижением температуры окружающей среды, носит светозависимыйхарактер. Десатурация в положениях А12 и А6 зависит: от света, тогда как со3 (А15) осуществляется-только на свету. Образование первой двойной связи в положении-А9, сопровождающее синтез: мононенасыщенных ЖК не зависит от температурыи/или света. Экспрессия генов (например, desB… Читать ещё >
Список литературы
- Еланская. И.В., Бибикова М. В., Богданова С. Л., Бабыкин М. М., Шестаков C.B. (1987) Бирепликонные векторные плазмиды для цианобактерии Synechocystis 6803 и Escherichia coli. Доклады АН СССР, 293, 716−719.
- Зинченко В.В., Пивен И. В., Мельник В. А., Шестаков C.B. (1999) Векторы для комплементационного анализа мутантов цианобактерий. Генетика, 35, 291−296.
- Зорина A.A., Миронов К. С., Степанченко Н. С., Синетова М. А., Куприянова Е. В., Аллахвердиев С. И., Лось Д. А. (2011) Системы регуляции стрессовых ответов у цианобактерий. Физиология растений, 57, 121.
- Клячко-Гурвич Г. Л., Пронина H.A., Ладыгин В. Г., Цоглин Л. Н., Семененко В. Е. (2000) Разобщённое функционирование отдельных фотосистем. I. Особенности и роль десатурации жирных кислот. Физиология' растений, 47, 688−698.
- Клячко-Гурвич Г. Л., Семенова А. Н., Семененко В. Е. (1980) Липидный обмен хлоропластов при адаптации клеток хлореллы к снижению освещённости. Физиология растений, 27, 370−379.
- Лось Д., А. (2001) Структура, регуляция экспрессии и функционирование десатураз жирных кислот. Успехи биологической химии, 41, 163−198.
- Лось Д.А. (2010) Сенсорные системы цианобактерий. М.: Научный мир, 218 с.
- Маргелис Л. (1983) Роль симбиоза в эволюции клетки. М., Мир, 354 с.
- Маслова И.П., Мурадян Е. А., Лапина С. С., Клячко-Гурвич Г.Л., Лось Д. А. (2004) Жирнокислотный состав липидов и термофильность цианобактерий. Физиология растений, 51, 396−403.
- Новикова Г. В., Мошков И. Е., Лось Д. А. (2007) Белковые сенсоры и передатчики холодового и осмотического стрессов у цианобактерий и растений. Молекулярная биология, 41,478−490.
- Шестаков С.В., Еланская И. В., Бибикова М. В. (1985) Векторы интеграциидля цианобактерии Synechocystis sp. 6803. Доклады АН СССР, 282, 176−179.100
- Aguilar P. S., De Mendoza D. (2006) Control of fatty acid desaturation: a mechanism conserved from bacteria to humans. Mol. Microbiol., 62, 1507−1514.1. V
- Ajdzanovic V., Spasojevic I.', Sosic-Jurjevic B., Filipovic B., Trifunovic S., Sekulic M., Milosevic V. (2011) The negative effect of soy extract on erythrocyte membrane-fluidity: An electron paramagnetic resonance study. J. Membr. Biol., 239, 131−135.
- Andreeva A., Popova A. (2010) Integration of P-carotene molecules in small" liposomes. Journal of Physics: Conference Series, 253, 12 066.
- Andreu V., Lagunas B., Collados R., Picorel Ri, Alfonso Mi (2010) The GmFAD7 gene family from soybean: identification of novel genes and tissue -specific conformations of the FAD7 enzyme involved in desaturase activity. J. Exp.Bot., 61,3371−3384.
- Aronsson H. (2008) The galactolipid monogalactosyldiacylglycerob (MGDG) contributes to photosynthesis-related processes in Arabidopsis thaliana. Plant Signaling & Behavior, 3, 1093−1095.
- Babbitt B., Huang L., Freire E. (1984) Thermotropic and dynamic characterization of interactions of acylated alpha-bungarotoxin with phospholipid bilayer membranes. Biochemistry, 23, 3920−3926.
- Barkan L., Vijayan P., Carlsson A.S., Mekhedov S., Browse J. (2006) A suppressor of fabl challenges hypotheses on the role of thylakoid unsaturation in photosynthetic function. Plant Physiol., 141, 1012−1020.
- Bausch A.R., Ziemann F., Boulbitch A.A., Jacobson K., Sackmann E. (1998) Local measurements of viscoelastic parameters of adherent cell surfaces by magnetic bead microrheometry. Biophy. J., 75, 2038−2049.
- Behan M.K., Macdonald A.G., Jones G.R., Cossins A.R. (1992) Homeoviscous adaptation under pressure: the pressure dependence of membrane order in brain myelin membranes of deep-sea fish. Biochim. Biophys. Acta, 1103, 317−323.
- Bonaventure G., Salas J.J., Pollard M. R, Ohlrogge J.B. (2003) Disruption of the FATB gene in Arabidopsis demonstrates an essential role of saturated fatty acids in plant growth. Plant Cell, 15, 1020−1033.
- Brown D.A. (2006) Lipid rafts, detergent-resistant membranes, and raft targeting signals. Physiology, 21,430−439.
- Bullock W.O., Fernandez J.M., Short J.M. (1987) XLl-Blue: a high efficiency plasmid transforming recA Escherichia coll strain with p-galactosidase selection. Biotechniques, 5, 376−379.
- Cahoon E.B., Lindqvist Y., Schneider G., Shanklin J. (1997) Redesign of soluble fatty acid desaturases from plants for altered substrate specificity and double bond position. Proc. Natl Acad. Set U.S.A., 94, 4872−4877.
- Carisey A., Stroud M., Tsang R., Ballestrem C. (2011) Fluorescence recovery after photobleaching. Meth. Mol. Biol, 769, 387−402.
- Casali N. (2003) Escherichia coli host strains. In: Methods in Molecular Biology, 235, Casali N., Preston A. (eds.). Totowa, NJ: Humana Press Inc., pp. 27−48.
- Chapman D., Quinn P.J. (1976) A method for the modulation of membrane fluidity: homogeneous catalytic hydrogenation of phospholipids and phospholipids and phospholipid-water model biomembranes. Proc. Natl Acad. Sci. U.S.A., 73, 3971−3975.
- Chen Q., Nimal J., Li W., Liu X., Cao W. (2011) Д-6 desaturase from borage converts linoleic acid to y-linolenic acid in HEK293 cells. Biochem. Biophys. Res. Commun., 410, 484−488.
- Chochina S.V., Avdulov N.A., Igbavboa U., Cleary J.P., O’hare E.O., Wood W.G. (2001) Amyloid beta-peptide 1−40 increases neuronal membrane fluidity: role of cholesterol and brain region. J. Lipid Res., 42, 1292−1297.
- Glerico E., M.- Ditty, J., L.- Golden, S., S. (2007) Specialized techniques for site-directed mutagenesis in cyanobacteria. In: Methods in Molecular Biology, 362, Rosato E. (ed.). Totowa, NJ: Humana Press Inc., pp. 155−171.
- DeLong, E.F., Yayanos A. A. (1985) Adaptation of the membrane lipids of a deep-sea bacterium to changes in hydrostatic pressure. Science, 228, 1101−1102.
- Duysen M., Huckle L., Mogen K., Freeman T. (1987) Chloramphenicol effects on chlorophyll degradation and photosystem I assembly in the chlorina CD3 wheat mutant. Photosynth. Res, 14, 159−169.
- Duysen M.E., Freeman T.P., Williams N.D., Huckle L.L. (1985) Chloramphenicol stimulation of light harvesting chlorophyll protein complex accumulation in a chlorophyll b deficient wheat mutant. Plant Physiol., 78, 531 536.
- Dyer D.H., Lyle K.S., Rayment I., Fox B.G. (2005) X-ray. structure of putative acyl-ACP desaturase DesA2 from Mycobacterium tuberculosis H37Rv. Prot. Sci., 14, 1508−1517.
- Dyer J.M., Mullen R.T. (2001) Immunocytological localization of two plant fatty acid desaturases in the endoplasmic reticulum. FEBS letters, 494, 44−47.
- Ehrt S., Schnappinger D. (2003) Isolation of plasmids from E. coli by alkaline lysis- In: Methods in Molecular Biology, 235, Gasali N., Preston A. (eds.). Totowa, NJ: Humana Press Inc., pp. 75−78.
- Falcone D.L., Gibson S., Lemieux B., Somerville G. (1994) Identification of a gene that- complements an- Arabidopsis mutant deficient in chloroplast (c)6 desaturase activity. Plant Physiol, 106, 1453−1459.
- Freire E., Markello T., Rigell G., Holloway P.W. (1983) Calorimetric and fluorescence characterization of interactions between- cytochrome 65 and phosphatidylcholine bW&y&xs. Biochemistry, 22,1675−16 801.
- Fudge D.S., Stcvcns E.D., Ballantyne J.S. (1998) No evidence for homeoviscous adaptation in a heterothermic tissue: tuna heat-exchangers. Am. J. Physiol., 275, R818−823.
- Gibson S.A., Arondeli V.- Iba K., Somerville C. (1994) Cloning of a temperature-regulated gene encoding a chloroplast co3 desaturase from Arabidopsis thaliana. Plant Physiol, 106, 1615−1621.
- Goni F. M, Alonso A., Bagatolli L.A., Brown R.E., Marsh D., Prieto M., Thewalt .l.L. (2008) Phase diagrams of lipid mixtures relevant to the study of membrane rafts. Biochim. Biophys. Acta, 1781, 665−684.
- Goodwin T.V., Mercer E.I. (1983) Introduction to Plant Biochemistry. Oxford: Pergamon Press, 677 p.
- Guillou H., D’andrea S., Rioux V., Barnouin R., Dalaine S., Pedrono F., Jan S., Legrand P. (2004) Distinct roles of endoplasmic reticulum cytochrome b5 and fused cytochrome b5-like domain for rat A6-desaturase activity. J. Lipid Res., 45, 32−40.
- Guler S., Seeliger A., Hartel H., Renger G., Benning C. (1996) A null mutant of Synechococcus sp. PCC7942 deficient in the sulfolipid sulfoquinovosyl diacylglycerol. J. Biol. Chem., 271, 7501−7507.
- Gurr M.I., Harwood J.L., Frayn K.N. (2002) Lipid biochemistry: an introduction. Oxford: Blackwell Science Ltd., 336 p.
- Guy C. (1999) Molecular responses of plants to cold shock and cold acclimation. J. Mol. Microbiol. Biotechnol., 1, 231−242.
- Hagio M., Gombos Z., Varkonyi Z., Masamoto K., Sato N., Tsuzuki M., Wada H. (2000) Direct evidence for requirement of phosphatidylglycerol in photosystem II of photosynthesis. Plant Physiol., 124, 795−804.
- Haidekker M.A., Ling T., Anglo M., Stevens H.Y., Frangos J.A., Theodorakis E.A. (2001) New fluorescent probes for the measurement of cell membrane viscosity. Chemistry & Biology, 8, 123−131.
- Haidl G., Opper C. (1997) Changes in lipids and membrane anisotropy in human spermatozoa during epididymal maturation. Human Reproduction, 12, 2720−2723.
- Hastings N., Agaba M., Tocher D.R., Leaver M.J., Dick J.R., Sargent J.R., Teale A.J. (2001) A vertebrate fatty acid desaturase with A5 and A6 activities. Proc. Natl. Acad. Sci. U.S.A., 98, 14 304−14 309.
- Hazel J.R. (1995) Thermal adaptation in biological membranes: is homeoviscous adaptation the explanation? Annu. Rev. Physiol., 57, 19−42.
- Heilmann I., Pidkowich M.S., Girke T., Shanklin J. (2004) Switching desaturase enzyme specificity by alternate subcellular targeting. Proc. Natl Acad. Sci. U.S.A., 101, 10 266−10 271.
- Heimburg T. (2009) Physical properties of biological membranes. In: Handbook-of Molecular. Biophysics: Methods and Applications. Bohr H.G. (ed.) Wiley-VCH, 1074 p.
- Higashi S., Murata N. (1993) An in v/vo-study of substrate specificities of acyl-lipid desaturases and acyltransferases in lipid synthesis in Synechocystis PCC6803. Plant Physiol, 102, 1275−1278.
- Hihara Y., Sonoike K., Kanehisa Mi, Ikeuchi M. (2003) DNA Microarray analysis of redox-responsive genes in the genome of the cyanobacterium Synechocystis sp. strainPCC 6803. J. Bacteriol., 185, 1719−1725:
- Hodzic A., Rappolt M., Amenitsch H., Laggner P., Pabst G. (2008) Differential modulation of membrane structure and- fluctuations by plant sterols and-cholesterol. Biophys. J., 94, 3935−3944.
- Horvath I., Multhoff G., Sonnleitner A., Vigh L. (2008) Membrane-associated stress proteins: more than simply chaperones. Biochim. Biophys. Aacta, 1778, 1653−1664.
- Huang F., Hedman E., Funk C., Kieselbach T., Schroder W.P., B. N. (2004) Isolation of outer membrane of Synechocystis sp. PCC 6803 and itsiproteomic characterization. Mol. Cell. Proteom., 3, 586−595.
- Ikeuchi Mi, Tabata S. (2001) Synechocystis sp- PCC 6803 — a useful tool in the study of the genetics of cyanobacteria. Photosynth. Res, 70, 73 -83 .
- Kachroo A., Fu D.Q., Havens W., Navarre D., Kachroo P., Ghabrial S.A. (2008): An oleic acid-mediated pathway induces^ constitutive defense signaling and enhanced resistance to multiple pathogens- in soybean. Mol. Plant Microbe Interact., 21:564−575.
- Kachroo A., Kachroo P. (2009)* Fatty acid-derived signals in’plant: defense. Annn. Rev. Phytopathol., 41, 153−176.
- Kamp F., Beyer K. (2006) Binding of a-synuclein affects, the lipid packing in bilayers of small vesicles. J. Biol. Chem., 281, 9251−9259.
- Kaneko T., Nakamura Y., Sasamoto S., Watanabe A., Kohara M., Matsumoto M., Shimpo S., Yamada M., Tabata S. (2003) Structural analysis of four large*plasmids harboring in a unicellular cyanobacterium, Synechocystis sp. PCC 6803. DNA’Res., 10, 221−228.
- Kaneko T., Tabata S. (1997) Complete genome structure of the unicellular cyanobsLCtevium^Synechocystis sp. PCC 6803. Plant Cell Physiol., 38, 1171−1176.
- Kang D., Gho Y.S., Suh M.- Kang C. (2002) Highly sensitive and fast protein detection with coomassie brilliant blue in sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Bull. Korean Chem. Soc., 23, 1511−1512.
- KargiotidouA., Deli D., Galanopoulou D., Tsaftaris A., Farmaki T. (2008) Low temperature and light regulate A12 fatty acid desaturases (FAD2) at a< transcriptional level in cotton (Gossypium hirsutum). J. Exp. Bot., 59, 2043−2056.
- Kis M.Z., O.- Farkas, T.- Wada, H.- Nagy, F.- Gombos, Z. (1998) Light-induced expression of fatty acid desaturase genes. Proc. Natl. Acad. Sci. U.S.A 95, 4209−4214.
- Kiseleva L.L., Serebriiskaya T.S., Horvath I., Vigh L., Lyukevich A.A., Los D.A. (2000) Expression of the gene for the A9 acyi-lipid desaturase in the thermophilic cyanobacterium. J. Mol. Microbiol. Biotechnol., 2, 331−338.
- Klyachko-Gurvich G.L., Tsoglin L.N., Doucha J., Kopetskii J., Shebalina (Ryabykh) I.B., Semenenko V.E. (1999) Desaturation of fatty acids as an adaptive response to shifts in light intensity. Physiol. Plantarum 107, 240−249.
- Kotani H., Kaneko T., Matsubayashi T., Sato S., Sugiura M., Tabata S. (1994) A physical map of the genome of a unicellular cyanobacterium Synechocystis sp. StrainPCC 6803. DNA Res., 1, 303−307.
- Laemmli U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227,
- Liberton M., Pakrasi H.B. (2008) Membrane systems in cyanobacteria.-In: The Cyanobacteria: Molecular Biology, Genetics and Evolution. Eds. A. Herrero, E. Flores, Caister Academic Press, Norfolk, UK, pp. 271−288.
- Los D., Horvath L, Vigh L., Murata N. (1993) The temperature-dependent expression of the desaturase gene desA in Synechocystis PCC 6803. FEBS Lett., 318, 57−60.
- Los D.A., Murata N. (1998) Structure and expression of fatty acid desaturases. Biochim. Biophys. Acta, 1394, 3−15.
- Los D.A., Murata N. (2004) Membrane fluidity and its roles in the perception of environmental signals. Biochim. Biophys. Acta, 1666, 142−157.
- Los D.A., Ray M.K., Murata N. (1997) Differences in the control of the temperature-dependent expression of four genes for desaturases in Synechocystis sp. PCC 6803. Mol. Microbiol. 25, 1167−1176.
- Los D.A., Zinchenko V.V. (2009) Regulatory role of membrane fluidity in gene expression. In: Lipids in Photosynthesis: Essential and Regulatory Functions, Wada H., Murata N., Govingee (eds.) Springer Science + Business Media B.V., pp. 329−348.
- Los D.A., Zorina A., Sinetova M., Kryazhov S., Mironov K., Zinchenko V.V.2010) Stress sensors and signal transducers in cyanobacteria. Sensors, 10, 23 862 415.
- Luddy F. (1979) Physical properties of fatty acids. J. Am. Oil Chem. Soc., 56, 759A-759A.
- Mansilla M.C., Cybulski L.E., Albanesi D., De Mendoza D. (2004) Control of membrane lipid fluidity by molecular thermosensors. J. Bacteriol, 186, 66 816 688.
- Maresca В., Schwartz J.H. (2006) Sudden origins: a general mechanism of evolution based on stress protein concentration and rapid environmental change. Anatomical Record. PartB, New Anatomist, 289, 38−46.
- M’Baye G., Mely Y., Duportail G., Klymchenko A.S. (2008) Liquid ordered and gel phases of lipid bilayers: fluorescent probes reveal close fluidity but different hydration. Biophys. J., 95, 1217−1225.
- Megha, Sawatzki P., Kolter T., Bittman R., London E. (2007) Effect of ceramide N-acyl chain and polar headgroup structure on the properties of ordered lipid domains (lipid rafts). Biochim. Biophys. Acta, 1768, 2205−2212.
- Mitchell A., G.- Martin, С., E. (1995) A novel cytochrome ?>5-like domain is linked to the carboxyl terminus of the Saccharomyces cerevisiae Л9 fatty acid desaturase. J. Biol. Chem., 270, 29 766−29 772.
- Mizuno T., Kaneko T., Tabata S. (1996) Compilation of all genes encoding bacterial two-component signal transducers in the genome of the cyanobacterium, Synechocystis sp. strain PCC 6803. DNA Res., 3,407−414.
- Mourek J., Mourek J., Jr. (2011) Developmentally dependent and different roles of fatty acids co6 and (c)3. Prague Med. Rep., 112, 81−92.
- Mouritsen O.G., Jorgensen K. (1994) Dynamical order and disorder in lipid bilayers. Chem. Phys. Lipids, 73, 3−25.
- Murata N., Los D.A. (2006) Histidine kinase Hik33 is an important participant in cold-signal transduction in cyanobacteria. Physiologia Plantarum, 126,17−27.
- Murata N., Wada H. (1995) Acyl-lipid desaturases and their importance in thetolerance and acclimatization to cold of cyanobacteria. The Biochemical journal, 308 (Pt 1), 1−8.
- Nakamura Y., Kaneko T., Hirosawa M., Miyajima N., Tabata S. (1998) Cyanobase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. strain PCC 6803. Nucleic Acids Research, 26, 63−67.
- Nakamura Y., Kaneko T., Tabata S. (2000) Cyanobase, the genome database for synechocysts sp. Strain pcc6803: Status for the year 2000. Nucleic Acids Research, 28, 72.
- Neuhoff V., Stamm R., Hansjorg E. (1985) Clear background and highlysensitive protein staining with coomassie blue dyes in polyacrylamide gels:A systematic analysis. Electrophoresis, 6, 427−448.
- Nichols W.A. (2003) Cloning per products with t-vectors. In: Methods in Molecular Biology, 235, Casali N., Preston A. (eds.). Totowa, NJ: Humana Press Inc., pp. 141−152.
- Nipper M.E., Majd S., Mayer M., Lee J.C., Theodorakis E.A., Haidekker M.A. (2008) Characterization of changes in the viscosity of lipid membranes with the molecular rotor FCVJ. Biochimica et biophysica acta, 1778,1148−1153.
- Norling B., Zak E., Andersson B., Parkasi H. (1998) 2d-isolation of pure plasma and thylakoid membranes from the cyanobacterium Synechocystis sp. PCC 6803. FEBSLetters., 436, 189−192.
- Norling B., Zarka A., Boussiba S. (1997) Isolation and characterization of plasma membranes from cyanobacteria. Physiol. Plantarum., 99, 495−504.
- Novo C., Fonseca E. (1989) Change of the unsaturation of the lymphocyte plasma membrane by ethanol and fatty acids. Actas Bioq., 2, 63−70.
- Ntambi J.M. (1999) Regulation of stearoyl-CoA desaturase by polyunsaturated fatty acids and cholesterol. Journal of Lipid Research, 40, 1549−1558.
- Okada K., Satoh K., Katoh S. (1991) Chloramphenicol is an inhibitor of photosynthesis. FEBS, 295, 155−158.
- Panpoom S., Los D.A., Murata N. (1998) Biochemical characterization of a A12 acyl-lipid desaturase after overexpression of the enzyme in Escherichia coli. Biochim. Biophys. Acta, 1390, 323−332.
- Phetsuksiri B., Jackson M., Scherman H., Mcneil M., Besra G.S., Baulard
- A.R., Slayden R.A., Debarber A.E., Barry C.E. 3rd, Baird M.S., Crick D.C., Brennan P.J. (2003) Unique mechanism of action of the thiourea drug isoxyl on Mycobacterium tuberculosis. J. Biol. Chem., 278, 53 123−53 130.
- Pisareva T., Kwon J., Oh J., Kim S., Ge C., Wieslander A., Choi J.S., Norling
- B. (2011) A model for membrane organization and protein sorting in the cyanobacterium Synechocystis sp. PCC 6803 inferred from' proteomics and multivariate sequence analyses. J. Proteome Res., 10, 3617−3631.
- Ponting C.P., Aravind L. (1997) PAS: a multifunctional domain family comes to light. Curr. Biol., 7, 674−677.
- Prakash J.S., Sinetova M., Zorina A., Kupriyanova E., Suzuki I., Murata N., Los D.A. (2009) DNA supercoiling regulates the stress-inducible expression of genes in the cyanobacterium Synecliocystis. Mol. BioSys., 5, 1904−1912.
- Quackenbush J. (2002) Microarray data normalization and transformation. Nat. Genet. Suppl., 32, 496−501.
- Raffaele S., Leger A., Roby, D. (2009) Veiy long chain fatty acid and lipid signaling in the response of plants to pathogens. Plant Signaling & Behavior, 4, 94−99.
- Reddy A.S., Nuccio M.L., Gross L.M., Thomas T.L. (1993) Isolation of a A6-desaturase gene from the cyanobacterium Synechocystis sp. strain PCC 6803 by gain-of-function expression in Anabaena sp. strain PCC 7120. Plant Mol. Biol., 22,293−300.
- Rippka R., Deruelles J., Waterbury J., Herdman M., Stanier R. (1979) Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Gen. Microbiol., Ill, 1−61.
- Russell N.J., Evans R.I., ter Steeg P.F., Hellemons J., Verhuel A., Abee T.1995) Membranes as a target for stress adaptation. Int. J. Food Microbiol., 28, 255−261.
- Ryan B.J. (2011) Differential precipitation and solubilization of proteins. In: Methods in Molecular Biology, 681, Walls D., Loughran S.T.T. (eds.). Totowa, NJ: Humana Press Inc., pp. 203−212.
- Sakamoto T., Los D.A., Higashi S., Wada H., Nishida I., Ohmori M., Murata N. (1994a) Cloning of oo3 desaturase from cyanobacteria and its use in altering the degree of membrane-lipid unsaturation. Plant Mol. Biol., 26, 249−263.
- Sakamoto T., Wada H., Nishida I., Ohmori M., Murata N. (1994b) Identification of conserved domains in the A12 desaturases of cyanobacteria. Plant Mol. Biol., 24, 643−650.
- Sakayori T., Shiraiwa Y., Suzuki I. (2009) A Synechocystis homo log of SipA protein, Ssl3451, enhances the activity of the histidine kinase Hik33. Plant Cell Physiol., 50, 1439−1448.
- Sakurai I., Shen J.-R., Leng J., Ohashi S., Kobayashi M., Wada H. (2006) Lipids in oxygen-evolving photosystem II complexes of cyanobacteria and higher plants. J. Biochem., 140, 201−209.
- Sambrook J., Frisch E.F., Maniatis T. (1989) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor: Cold Spring Harbor Lab. Press, 1659 p.
- Sato M., Theret D.P., Wheeler L.T., Ohshima N., Nerem R.M. (1990) Application of the micropipette technique to the measurement of cultured porcine aortic endothelial cell viscoelastic properties. J. Biomech. Eng. 112, 263−268.
- Sato N., Wada H. (2009) Lipid biosynthesis and its regulation in cyanobacteria. In: Lipids in Photosynthesis: Essential and Regulatory Functions. Wada H., Murata N. (eds.) Springer Science + Business Media B.V., pp. 157−177.
- Sato S., Shimoda Y., Muraki A., Kohara M., Nakamura Y., Tabata S. (2007) A large-scale protein-protein interaction analysis in Synechocystis sp. PCC 6803. DNA Research, 14, 207−216.
- Schultz D.J., Suh M.C., Ohlrogge J.B. (2000) Stearoyl-acyl carrier protein and unusual acyl-acyl carrier protein desaturase activities are differentially influenced by ferredoxin. Plant Physiol, 124, 681−692.
- Scrimgeour C. (2005) Chemistry of Fatty Acids. In: Bailey’s Industrial Oil and Fat Products, Shahidi F. (ed.) John Wiley & Sons, Inc., pp. 1−43.
- Selstam E., Campbell D. (1996) Membrane lipid composition of the unusual cyano bacterium Gloeobacter violaceus sp. PCC 742 T, which lacks sulfoquinovosyl diacylglycerol. Arch Microbiol, 166, 132−135.
- Shanklin J., Somerville C. (1991) Stearoyl-acyl-carrier-protein desaturase from higher plants is structurally unrelated to the animal and fungal homologs. Proc. Natl Acad. Sci. U.S.A., 88, 2510−2514.
- Shi X., Herschlag D. (2009) Fluorescence polarization anisotropy to measure RNA dynamics. Meth. Enzymol., 469, 287−302.
- Simons K., Ikonen E. (1997) Functional rafts in cell membranes. Nature, 387, 569−572.
- Sinensky M. (1974) Homeoviscous adaptation—a' homeostatic process that regulates the viscosity of membrane lipids in Escherichia coli. Proc. Natl Acad. Sci. U.S.A., 71, 522−525.
- Singer S.J., Nicolson G.L. (1972) The fluid mosaic model of the structure of cell membranes. Science, 175, 720−731.
- Stein J.R. (1973) Handbook of phycological methods: culture methods and growth measurements. New York: Cambridge University Press, 460 p.
- Strittmatter P., Spatz L., Corcoran D., Rogers M.J., Setlow B., Redline R. (1974) Purification and properties of rat liver microsomal stearyl coenzyme A desaturase. Proc. Natl. Acad. Sci. U.S.A., 71, 4565−4569.
- Subczynski W., K.- Wisniewska, A. (2000) Physical properties of lipid bilayer membranes: relevance to membrane biological functions. Acta Biochim. Pol., 47, 613−625.
- Suzuki I., Kanesaki Y., Mikami K., Kanehisa M., Murata, N. (2001) Cold-regulated genes under control of the cold sensor Hik33 in Synechocystis. Mol. Microbiol., 40, 235−244.
- Suzuki I., Los D.A., Kanesaki Y., Mikami K., Murata N. (2000) The pathway for perception and transduction of low-temperature signals in Synechocystis. EMBOJ., 19, 1327−1334.
- Swords W.E. (2003) Chemical transformation of E. coli. In: Methods in Molecular Biology, 235, Casali N., Preston A. (eds.). Totowa, NJ: Humana’Press Inc., pp. 49−53.
- Tan X., Zhu T., Shen S., Yin C., Gao H., Xu X. (2011) Role of Rbpl in the acquired chill-light tolerance of cyanobacteria. J. Bacteriol., 193, 2675−2683.
- Tasaka Y., Gombos Z., Nishiyama Y., Mohanty P., Ohba T., Ohki K., Murata
- N. (1996) Targeted mutagenesis of acyl-lipid desaturases in Synechocystis: Evidence for the important roles of polyunsaturated membrane lipids in growth, respiration and photosynthesis. EMBOJ., 15, 6416−6425.
- Taylor B.L., Zhulin I.B. (1999) PAS Domains: Internal sensors of oxygen, redox potential, and light. Microbiol. Mol. Biol. Rev., 63, 479−506.
- Torres-Franklin M.-L., Repellin A., Huynh V.-B., D’arcy-Lameta A., Zuily-Fodil Y., Pham-Thi A.-T. (2009) Omega-3 fatty acid desaturase (FAD3, FAD7,
- FADS) gene expression and linolenic acid content in cowpea leaves submitted to drought and after rehydration. Environ. Exp. Bot., 65, 162−169.
- Vigh L., Nakamoto H., Landry J., Gomez-Munoz A., Harwood J.L., Horvath1. (2007) Membrane regulation of the stress response from prokaryotic models to mammalian cells. Ann. NY Acad. Set, 1113, 40−51.
- Vioque A. (1992) Analysis of the gene encoding the RNA subunit of ribonuclease P from cyanobacteria. Nucleic Acids Res., 20, 6331 -6337.
- Wada H., Murata N. (1990) Temperature-induced changes in the fatty acid composition of the cyanobacterium, Synechocystis PCC6803. Plant Physiol., 92, 1062−1069.
- Wada, H., Schmidt H., Heinz E., Murata N. (1993) In vitro ferredoxin-dependent desaturation of fatty acids in cyanobacterial thylakoid membranes. J. Bacteriol., 175, 544−547.
- Wang Y., Xu W., Chitnis P. (2009) Identification and bioinformatic analysis of the membrane proteins of Synechocystis sp. PCC 6803. Proteome Sci., 7, 11.
- Whittle E.J., Tremblay A.E., Buist P.H., Shanklin J. (2008) Revealing the catalytic potential of an acyl-ACP desaturase: tandem selective oxidation of saturated fatty acids. Proc. Natl Acad. Sci. U.S.A., 105, 14 738−14 743.
- Williams C.M., Burdge G. (2007) Long-chain n-3 PUFA: plant v. marine sources. Proc. Nutr. Society, 65, 42−50.
- Williams J.G.K. (1988) Construction-of specific mutations in photosystem II photosynthetic reaction center by genetic engineering methods in Synechocystis 6803. Methods Enzymol., 167, 766−778:
- Wu G., Truksa M., Datla N., Vrinten P., Bauer J., Zank T., Cirpus P., Heinz E., Qiu X. (2005) Stepwise engineering to produce high yields of very long-chain polyunsaturated fatty acids in plants. Nature Biotechnology, 23, 1013−1017.
- Yamajx-Hasegawa A., Tsujimoto M. (2006) Asymmetric distribution of phospholipids in biomembranes. Biological & Pharmaceutical Bulletin, 29, 15 471 553.
- Yu B., Xu C., Benning C. (2002) Arabidopsis disrupted in SQD2 encoding sulfolipid synthase is impaired in phosphate-limited growth. Proc. Natl. Acad. Sci. U.S.A., 99, 5732−5737.
- Zang X., Liu B., Liu S., Arunakumara K.K.I.U., Zhang X. (2007) Optimum conditions for transformation of Synechocystis sp. PCC 6803. J. Microbiol., 45, 241−245.
- Zhukov A.V., Yereshchagin A.G. (1970) Heptadecanoic acid as an internal standart in the gas chromatographic weight determination of fatty acids. J. Chromatogr., 51, 155−166.